| Package |
Thresher |
| Version |
1.1.3 |
| Date |
2019-12-07 |
| Title |
Threshing and Reaping for Principal Components |
| Author |
Kevin R. Coombes |
| Maintainer |
Kevin R. Coombes <krc@silicovore.com> |
| Description |
Defines the classes used to identify outliers (threshing) and compute the number of significant principal components and number of clusters (reaping) in a joint application of PCA and hierarchical clustering. See Wang et al., 2018, <doi:10.1186/s12859-017-1998-9>. |
| Depends |
R (>= 3.1), ClassDiscovery, PCDimension |
| Imports |
methods, stats, graphics, grDevices, MASS, colorspace, movMF, ade4, oompaBase |
| Suggests |
NbClust |
| License |
Apache License (== 2.0) |
| biocViews |
Clustering |
| URL |
http://oompa.r-forge.r-project.org/ |
| NeedsCompilation |
no |
| Packaged |
2022-07-20 17:57:03 UTC; KRC |
| Built |
R 4.2.1; ; 2022-07-20 17:57:28 UTC; windows |
| User Manual | Thresher-manual.pdf |
| R CHECK | 00check.log |
| Vignettes |
Thresher.pdf |
